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Hi Steve, I also get this message (Image Exception : #99 :: Out of memory terminate called after throwing an instance of 'RBD_COMMON::BaseException') when I run FAST (/usr/local/fsl/bin/fast -t 1 -n 3 ) We're also running on a 32-bit machine. I would appreciate learning about fixes you guys come up with for 32-bit machine users. Thanks, Lisa Lu University of Illinois at Chicago On Thu, 5 Feb 2009 09:57:20 +0000, Steve Smith <[log in to unmask]> wrote: >Urgh - 32-bit! That probably explains the problem, but we can still >have a quick look at your data. >Cheers, Steve. > > >On 5 Feb 2009, at 09:50, Mareike Menz wrote: > >> Dear Matthew, >> >> thanks again for your time. >> I uploaded the directory and got the number 251845. >> I also included the raw data in the directory. >> By the way - we are still working on 32-bit architecture (and no >> chance to change that soon), >> nevertheless it worked before ;). >> >> Many regards, >> Mareike >> >> >> >> Matthew Webster wrote: >>> Hi, >>> FSL4.1.2 does make additional fslstats calls, but I'm surprised >>> it still crashes on the 4GB machine. Can you tar up the feat >>> directory and upload it to: >>> http://www.fmrib.ox.ac.uk/cgi-bin/upload.cgi >>> and let us know the 6-digit reference number? >>> Many Regards >>> Matthew >>>> Dear FSL Team, >>>> >>>> We recently updated FSL from 4.0 to 4.12. >>>> Ever since feat crashes during preprocessing with >>>> Image Exception : #99 :: Out of memory >>>> terminate called after throwing an instance of >>>> 'RBD_COMMON::BaseException' >>>> after /common/apps/fsl-412/bin/fslstats prefiltered_func_data_st - >>>> k mask -p 50. >>>> >>>> This happens with exactly the same data I evaluated before, with >>>> the same parameters - I only reopened the *fsf - files and resaved >>>> them under Feat from FSL 4.12 (and changed location of MNI_152 >>>> etc.). I also use identical hardware (identical machine, maybe a >>>> few updates) which worked well before (in December). The memory >>>> load sums up to about 90% (1GB RAW) and then the process crashes. >>>> Interestingly, this happened also with 4GB RAM, when I testes >>>> different hardware. >>>> >>>> To us this looks like a strange memory conflict (maybe connected >>>> to our configurations) and now we wonder if you changed anything >>>> in memory handling between version 4.0 and version 4.1? >>>> >>>> Thanks for your help and greetings from Hamburg, >>>> Mareike >>>> >>>> >>>> >>>> >>>> -- >>>> Mareike Menz >>>> NeuroImage Nord Lübeck >>>> University Medical Center Hamburg-Eppendorf, Bldg. S10 >>>> Martinistr. 52 >>>> 20246 Hamburg >>>> Germany >>>> +49 40 7410 53683 >>>> [log in to unmask] >>>> ------------------------- >>>> () ascii ribbon campaign >>>> /\ - against html mail >>>> >>>> >>>> -- >>>> Pflichtangaben gemäß Gesetz über elektronische Handelsregister und >>>> Genossenschaftsregister sowie das Unternehmensregister (EHUG): >>>> >>>> Universitätsklinikum Hamburg-Eppendorf >>>> Körperschaft des öffentlichen Rechts >>>> Gerichtsstand: Hamburg >>>> >>>> Vorstandsmitglieder: >>>> Prof. Dr. Jörg F. Debatin (Vorsitzender) >>>> Dr. Alexander Kirstein >>>> Ricarda Klein >>>> Prof. Dr. Dr. Uwe Koch-Gromus >> >> -- >> Mareike Menz >> NeuroImage Nord Lübeck >> University Medical Center Hamburg-Eppendorf, Bldg. S10 >> Martinistr. 52 >> 20246 Hamburg >> Germany >> +49 40 7410 53683 >> [log in to unmask] >> ------------------------- >> () ascii ribbon campaign >> /\ - against html mail >> >> >> -- >> Pflichtangaben gemäß Gesetz über elektronische Handelsregister und >> Genossenschaftsregister sowie das Unternehmensregister (EHUG): >> >> Universitätsklinikum Hamburg-Eppendorf >> Körperschaft des öffentlichen Rechts >> Gerichtsstand: Hamburg >> >> Vorstandsmitglieder: >> Prof. Dr. Jörg F. Debatin (Vorsitzender) >> Dr. Alexander Kirstein >> Ricarda Klein >> Prof. Dr. Dr. Uwe Koch-Gromus > > >-------------------------------------------------------------------------- - >Stephen M. Smith, Professor of Biomedical Engineering >Associate Director, Oxford University FMRIB Centre > >FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK >+44 (0) 1865 222726 (fax 222717) >[log in to unmask] http://www.fmrib.ox.ac.uk/~steve >-------------------------------------------------------------------------- -