OK - I am out of ideas - can you tar up the directory and put it on a
website or ftp site for me to take a look at?
Thanks
Tim
On Fri, 15 Oct 2004, David Brennan wrote:
> Thanks once again for your help!
>
> The output was as follows;
> avwstats nodif_brain_mask -r -R -v -V
> 0.000000 1.000000 0.000000 1.000000 1507328 8524000.216897 292403
> 1653550.677372
>
> avwstats ${basename}_FA -r -R -v -V
> 0.000000 0.000000 0.000000 0.000000 1507328 8524000.216897 0 0.000000
>
> avwstats ${basename}_V1 -r -R -v -V
> 0.000000 1.000000 0.000000 1.000000 4521984 25572000.650692 292403
> 1653550.677372
>
> avwinfo ${basename}_FA
> dim1 256
> dim2 256
> dim3 23
> dim4 1
> datatype 16
> pixdim1 -0.9399999976
> pixdim2 0.9399999976
> pixdim3 6.4000000954
> pixdim4 1.0000000000
> cal_max 0.0000
> cal_min 0.0000
> glmax 0
> glmin 0
> origin1 0
> origin2 0
> origin3 0
> file_type ANALYZE-7.5
>
>
> Hope this helps!
>
> Cheers
>
> Dave
>
>
> On Fri, 15 Oct 2004 10:57:51 +0100, Tim Behrens <[log in to unmask]> wrote:
>
> >Hi - yep this all looks ok.
> >
> >Can you run
> >
> >if you ran dtifit from the command line
> >basename=(whatever you specified as your output basename in dtifit)
> >
> >if you ran from the GUI:
> >basename=dti
> >
> >then..
> >
> >
> >avwstats nodif_brain_mask -r -R -v -V
> >
> >avwstats ${basename}_FA -r -R -v -V
> >avwstats ${basename}_V1 -r -R -v -V
> >
> >avwinfo ${basename}_FA
> >
> >and tell me the output
> >
> >Thanks
> >
> >Tim
> >
> >
> >
> >
> >
> >
>
--
-------------------------------------------------------------------------------
Tim Behrens
Centre for Functional MRI of the Brain
The John Radcliffe Hospital
Headley Way Oxford OX3 9DU
Oxford University
Work 01865 222782
Mobile 07980 884537
-------------------------------------------------------------------------------
