Hi All,
In fact, I have posted this thread before but I repost this just in case. My previous message is as follows and I would really appreciate any opinions.
Thanks!
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Hi FSL experts,
I am now trying to generate physio noise regressors using PNM, and have several questions about the optimal stage of this application.
In my preprocessing pipelines, for example, I am doing ICA denoising and moving native epi to mni space before the first level of glm. So, individual-level GLM analysis will run on mni space as SPM does. In this case, I wondered I should generate physio-regressors with ica-denoised & mni-normalized images. Otherwise, is it fine to do this with raw images initially before ICA-denoised and MNI normalized, and put regressors into 1st GLM which is running for denoised epi on mni space?
I would appreciate any comments!
Best,
Tae-Ho
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