Hi Zhen,
The --label option should do what you want:
--label input 3D label image (generate separate mean for each
integer label value - cannot be used with showall)
Cheers,
Paul
On 18/03/2019, Zhen Zhou <[log in to unmask]> wrote:
> Dear FSL experts,
>
> I have a preprocessed 4D nii file (with 420 time points), and a ROI mask
> (with 112 ROIs).
> I want to use the ROI to extract time series. When I use fslmeants, I found
> the output is a text file with a 420*1 matrix. It seems like the time series
> has beed averaged over all ROIs.
> Is there any way not to average over the ROIs, i.e., to generate a 420*112
> size matrix. I didn’t find any options of fslmeants which can do this.
>
> Zhen
> Best
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