Hi All,
New to JISCmail and FSL. Wondered if you could help...
We are trying to define the anatomical areas of highest activation from our FEAT analysis. To do this we are loading the FEAT output in FSLEyes, which appears to be in standard space (confirmed with MNI overlay), then using the cluster co-ordinates generated by FEAT we are attempting to use an atlas to define the region, however, in FSLEyes the cross hairs often land out of brain space (presumably the co-ordinates from FEAT relate to the space of the functional data set and are not in standard space, therefore don't map onto my coregistered data set or the atlases - if so how do I use an atlas to determine what anatomy the high thresholded cluster co-ordinates refer to?).
Any advice would be warmly received.
Many thanks!
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