Dear Alexandra,
On 3 Dec 2018, at 12:35, Korda, Dr. Alexandra wrote:
> Dear Dr. Gaser,
>
> Thank you, that works and provides me with p1* and p2*, my main goal
> is to produce p0*.
> Can you help me what I must change in order to do so?
either you call that in expert mode (call cat12(‘expert’)) or change
that line in cat_defaults:
cat.output.label.native = 1;
Best,
Christian
>
> Many thanks in advance,
> Alexandra Korda
> ________________________________________
> Από: Christian Gaser [[log in to unmask]]
> Στάλθηκε: Σάββατο, 1 Δεκεμβρίου 2018 3:35
> μμ
> Προς: [log in to unmask]; Korda, Dr. Alexandra
> Κοιν.: Christian Gaser
> Θέμα: [Warnung: Eventuell gefälschter Absender]Re: cat12
> segmentation problem on HPC
>
> Dear Alexandra,
>
> please try the new update that should solve this issue.
>
> Best,
>
> Christian
>
> On Fri, 30 Nov 2018 12:25:36 +0000, Korda, Dr. Alexandra
> <[log in to unmask]> wrote:
>
>> Hi,
>>
>> I have the following problem whena I am running CAT!@ segmentation on
>> HPC, but locally it works , could you please help me:
>>
>>
>> CAT Preprocessing error for mprage:
>>
>> ------------------------------------------------------------------------
>>
>> Too many output arguments.
>>
>> ------------------------------------------------------------------------
>>
>> 743 - cat_main_registration
>>
>> 665 - cat_main
>>
>> 721 - cat_run_job1070
>>
>> 16 - cat_run_newcatch
>>
>> 398 - run_job
>>
>> 161 - cat_run
>>
>> 29 - cfg_run_cm
>>
>> 1717 - local_runcj
>>
>> 972 - cfg_util
>>
>> 469 - fill_run_job
>>
>> 247 - spm_jobman
>>
>> 13 - p0
>>
>> 91 - run
>>
>> ------------------------------------------------------------------------
>>
>> Warning:cat_io_report:CATgui: Incomplete report creation in
>> cat_io_report because of incomplete CAT parameters.
>>
>>
>> Print 'Graphics' figure to:
>>
>> /gpfs/project/korda/Pre_process/basis1_226/report/catreport_mprage.pdf
>>
>> 30-Nov-2018 13:10:29 - Failed 'CAT12: Segmentation'
>>
>> Error using spm_shoot_update
>>
>> Too many output arguments.
>>
>> In file "/software/SPM/12/toolbox/cat12/cat_main_registration.m"
>> (v1349), function "cat_main_registration" at line 743.
>>
>> In file "/software/SPM/12/toolbox/cat12/cat_main.m" (v1361), function
>> "cat_main" at line 665.
>>
>> In file "/software/SPM/12/toolbox/cat12/cat_run_job1070.m" (v1348),
>> function "cat_run_job1070" at line 721.
>>
>> In file "/software/SPM/12/toolbox/cat12/cat_run_newcatch.m" (???),
>> function "cat_run_newcatch" at line 16.
>>
>> In file "/software/SPM/12/toolbox/cat12/cat_run.m" (v1332), function
>> "run_job" at line 398.
>>
>> In file "/software/SPM/12/toolbox/cat12/cat_run.m" (v1332), function
>> "cat_run" at line 161.
>>
>>
>> The following modules did not run:
>>
>> Failed: CAT12: Segmentation
>>
>> Kind regards,
>> Alexandra
>>
>
>
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