Hi FSL Experts,
I am trying to run qboot on my Diffusion MRI data to generate CSA ODF. And I ran the following command:
qboot -k data.nii.gz -m nodif_brain_mask.nii.gz -r bvecs -b bvals --model=3 --ns=1 --q=index.txt
The program seems to be running fine, however, once it reaches the end, I get the following error:
186457/186461
186458/186461
186459/186461
186460/186461
186461/186461
An exception has been thrown
Logic error:- detected by Newmat: index error: requested index = 186462
MatrixType = Rect # Rows = 1; # Cols = 186461
Although I checked the answers to this question and changed my data accordingly, it still does not work. Further detailed information is listed below.
-----------------------------------------
./data
data_type FLOAT32
dim1 140
dim2 140
dim3 90
dim4 67
datatype 16
pixdim1 1.000000
pixdim2 1.000000
pixdim3 1.000000
pixdim4 1.000000
cal_max 0.0000
cal_min 0.0000
file_type NIFTI-1+
./nodif_brain_mask
data_type UINT8
dim1 140
dim2 140
dim3 90
dim4 1
datatype 2
pixdim1 1.000000
pixdim2 1.000000
pixdim3 1.000000
pixdim4 1.000000
cal_max 0.0000
cal_min 0.0000
file_type NIFTI-1+
num lines in ./bvals
1
num words in ./bvals
67
num lines in ./bvecs
3
num words in ./bvecs
201
-----------------------------------------------------
bvales = 5 745 750 755 750 745 750 5 1505 1500 1510 1495 1490 1495 1505 1505 1495 1495 1505 1505 1500 1500 1500 1495 5 2990 3005 2995 3005 3005 2995 3015 3010 2995 3010 3010 2995 2990 3005 3010 3000 3000 3010 3005 3010 3010 3010 2990 3000 3000 3000 2990 3005 3005 3005 3005 2990 3000 3010 3000 2990 2995 3005 2995 2995 3005 3000
--------------------------
qshell = 7 17 43
or = 3 6 16 42 does not work
I do not what is wrong. How can I fix this error?
Best Regards,
Feihong
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