Dear all,
please forgive me bringing this up again but I still have no clue
for the reason for this behavior:
I am running Class3D (4 classes, without alignment) using a
run_data.star file from a refinement job that converged at
"_rlnCurrentResolution 3.699153". The Class3D runs
fine until "_rlnCurrentResolution 3.668067", but
from there onward no output is being generated despite the CPUs
continuing running at close to 100% for more than 15 hours by now. All
previous iterations (including maximization) took about 90 min. The last
output I was:
Maximization ..........................................~~(,_,">
29.50/29.50 min .......................................~~(,_,">
I also tried to modify the run_data.star file by removing some records
with very high and very low values of _rlnLogLikeliContribution #27 but
no avail. It always stalls at the above resolution.
I also run the same dataset on another workstation with the same result!
What might be the reason for this? It is very well possible that this is
the absolute highest resolution attainable with this particular dataset
but why would relion not continue putting out the same resolution for
all following iterations?
Thank you very much for hints!
bw Dieter
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Dieter Blaas,
Max F. Perutz Laboratories
Medical University of Vienna,
Inst. Med. Biochem., Vienna Biocenter (VBC),
Dr. Bohr Gasse 9/3,
A-1030 Vienna, Austria,
Tel: 0043 1 4277 61630,
Fax: 0043 1 4277 9616,
e-mail: [log in to unmask]
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