Hi Michiel
Thank you for your suggestions.
For the fslhd info, they are all identical with the exception of the seed being FLOAT32 and datatype 16 and the segment being INT32 and datatype 8.
It appears the seeds_to_* files are all correctly aligned to the seed region, just not the find_the_biggest output.
Upon further close inspection, it appears that the find_the_biggest segment does conform to the original seed region; however, it looks like there is actually a second additional seed region that is partially overlapping the original seed. In other words, it looks like the find_the_biggest output is a combination of two different seeds, the original and one that doesn't conform to any structure.
What is bizarre is that I have the exact same code for the left sided seed and it appears to work correctly.
Erik
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