Hello,
The program mri_convert ( which should be provided as part of Freesurfer ) can convert between mgz and NIFTI format.
Kind Regards
Matthew
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Dr Matthew Webster
FMRIB Centre
John Radcliffe Hospital
University of Oxford
> On 28 Dec 2017, at 16:44, Anna Mynick <[log in to unmask]> wrote:
>
> Hi all,
>
> I’m pretty new to using fslview and noticed that you can’t open .mgz files — if you try, the program will say “missing header/image file”. I’ve been using freeview until this point and loading .mgz files there has never caused any problem.
>
> Is there a way to circumvent this issue in fslview to be able to visualize .mgz files?
>
> Thanks very much for any help!
> Anna
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