Hi Anderson,
I checked online on how to do it, and it seems that my Ubuntu version
is 64 bit (after running uname -a one of the specifications shown is
x86_64). After CD-ing into the folder you specified and running "make"
I receive the following error:
makemex -O -largeArrayDims CFLAGS='$CFLAGS -std=c99' zstream.c
make: mex: Command not found
Makefile:34: recipe for target 'zstream.mexa64' failed
make: *** [zstream.mexa64] Error 127
Do you have any suggestions? Thanks a lot!
On 10/5/17, Anderson M. Winkler <[log in to unmask]> wrote:
> Hi Darko,
>
> It looks like the i/o tools for GIFTI aren't compiled for your platform.
> You don't say but I suspect you're using a 32-bit Ubuntu, whereas the files
> already come compiled for 64-bit. Try running "make" from inside
> /home/lisak/Desktop/palm-alpha109/fileio/@gifti/private/, then trying
> again.
>
> All the best,
>
> Anderson
>
>
> On Friday, 29 September 2017, Darko Komnenić <[log in to unmask]> wrote:
>
>> Hi Anderson,
>> thank you for the fast reply! This are my operating system features:
>> Distributor ID: Ubuntu; Description: Ubuntu 16.04.2 LTS; Release:
>> 16.04. If you need some additional info, let me know!
>> Best,
>> Darko
>>
>> On 9/29/17, Anderson M. Winkler <[log in to unmask]> wrote:
>> > Hi Darko,
>> >
>> > What platform are you using? Seems like the GIFTI functions aren't
>> compiled
>> > for your operating system & architecture.
>> >
>> > All the best,
>> >
>> > Anderson
>> >
>> >
>> >
>> > On 28 September 2017 at 13:19, Darko Komnenić <[log in to unmask]>
>> wrote:
>> >
>> >> Hi everyone,
>> >> I am trying to run PALM to compare cortical myelin content between
>> >> patients and controls. After I entered the palm command, I got the
>> >> following error:
>> >>
>> >> Loading surface 1/1: /home/lisak/Desktop/NMO_
>> >> myelin/L_surf_midthick.surf.gii
>> >> error: gifti_Data:
>> >> /home/lisak/Desktop/palm-alpha109/fileio/@gifti/private/zstream.mex:
>> >> failed to load:
>> >> /home/lisak/Desktop/palm-alpha109/fileio/@gifti/private/zstream.mex:
>> >> invalid ELF header
>> >> error: called from
>> >> read_gifti_file_standalone>gifti_Data at line 167 column 11
>> >> read_gifti_file_standalone>gifti_DataArray at line 125 column 31
>> >> read_gifti_file_standalone at line 48 column 29
>> >> gifti at line 71 column 22
>> >> palm_miscread at line 279 column 13
>> >> palm_takeargs at line 1559 column 19
>> >> palm_core at line 33 column 11
>> >> palm at line 81 column 1
>> >>
>> >> So I tried to open this zstream.mex file, and I get the information:
>> >> "Could not display zstream.mex". The file is of an unknown type." Do I
>> >> need to have installed some additional program so that this file can
>> >> be loaded and so that PALM can work?
>> >>
>> >> This is also my first time trying PALM, so I apologize if the question
>> >> is trivial.
>> >> Thanks in advance!
>> >> Darko
>> >>
>> >
>>
>
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