Dear all,
After a first Class2D run I wanted to sort the particles but relion
crashes and remains locked until .lock_default_pipeline.star is deleted:
after the crash there is nothing else than the file
'run.job' in the respective directory:
> more run.job
job_type == 6
is_continue == false
Pixel size in references (A) == -1
Autopicking references: ==
Are References CTF corrected? == Yes
Ignore CTFs until first peak? == No
Submit to queue? == No
Input particles to be sorted: == Select/job014/particles.star
Are these from an Extract job? == No
Minimum dedicated cores per node: == 1
Number of MPI procs: == 1
Additional arguments: ==
Queue submit command: == qsub
Standard submission script: == 8\u02fc
Queue name: == openmpi
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the particles used in the above sorting look normal when viewd in File >
display
Thanks for hints, Dieter
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Dieter Blaas,
Max F. Perutz Laboratories
Medical University of Vienna,
Inst. Med. Biochem., Vienna Biocenter (VBC),
Dr. Bohr Gasse 9/3,
A-1030 Vienna, Austria,
Tel: 0043 1 4277 61630,
Fax: 0043 1 4277 9616,
e-mail: [log in to unmask]
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