I am new to FSL and am wondering whether there is a way in FSL to identify which volumes in a raw DTI .nii file have too much motion/are poor quality and should be excluded. I will also be visually checking over scans, and using motion correction, but am working with a paediatric sample so will need to exclude some volumes completely. If I am unable to do this in FSL, is anyone able to recommend an alternative way or program to identify these volumes?
Thanks in advance,
Jess.
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