Dear Helmut,
we would like to check that data set and will separately send you an upload link. Beside this, I can imagine that that it is somewhat annoying to get error messages depending on the CAT12 version. We are currently trying to make CAT12 more stable and to catch these problems and using less vulnerable approaches instead...
Best,
Christian
On Fri, 28 Oct 2016 15:54:45 +0100, MRI More <[log in to unmask]> wrote:
>Dear everyone,
>
>I have encountered an error message with CAT12 r1059 together with SPM12 r6906 running under Matlab 2016a on a 64bit Win8 PC, see below. As I had not observed any problems with earlier CAT12 versions on this particular file I tried out an older CAT version (r998) together with SPM12 r6906 (the version with the recent updates), which runs smoothly. Haven't tested the other versions in between.
>
>Best
>
>Helmut
>
>
>% ---
>
>Skull-stripping using graph-cut (gcutstr=0.50):
> WM initialisation Warning: WARNING: cat_vol_morph - lab - no object!
>> In cat_vol_morph (line 119)
> In cat_main_gcut (line 93)
> In cat_main (line 883)
> In cat_run_job (line 614)
> In cat_run_newcatch (line 13)
> In cat_run>run_job (line 247)
> In cat_run (line 155)
> In cfg_run_cm (line 29)
> In cfg_util>local_runcj (line 1688)
> In cfg_util (line 959)
> In cfg_ui>MenuFileRun_Callback (line 703)
> In gui_mainfcn (line 95)
> In cfg_ui (line 53)
>Warning: WARNING: cat_vol_morph - lab - no object!
>> In cat_vol_morph (line 119)
> In cat_main_gcut (line 94)
> In cat_main (line 883)
> In cat_run_job (line 614)
> In cat_run_newcatch (line 13)
> In cat_run>run_job (line 247)
> In cat_run (line 155)
> In cfg_run_cm (line 29)
> In cfg_util>local_runcj (line 1688)
> In cfg_util (line 959)
> In cfg_ui>MenuFileRun_Callback (line 703)
> In gui_mainfcn (line 95)
> In cfg_ui (line 53)
> 2s
> 2s
>Amap using initial SPM12 segmentations (MRF filter strength 0.00): MRF priors: alpha 0.695 0.000 0.305 7s
>Final cleanup (gcutstr=0.50):
> Level 1 cleanup (ROI estimation) 4s
> Level 1 cleanup (brain masking) Warning: WARNING: cat_vol_morph - lab - no object!
>> In cat_vol_morph (line 119)
> In cat_vol_morph (line 107)
> In cat_main_cleanup (line 58)
> In cat_main (line 1012)
> In cat_run_job (line 614)
> In cat_run_newcatch (line 13)
> In cat_run>run_job (line 247)
> In cat_run (line 155)
> In cfg_run_cm (line 29)
> In cfg_util>local_runcj (line 1688)
> In cfg_util (line 959)
> In cfg_ui>MenuFileRun_Callback (line 703)
> In gui_mainfcn (line 95)
> In cfg_ui (line 53)
>
>------------------------------------------------------------------------
>CAT Preprocessing error: MATLAB:numberOfArrayDimensionsMustMatch: . 59 - cat_main_cleanup
> 1012 - cat_main
> 614 - cat_run_job
> 13 - cat_run_newcatch
> 247 - run_job
> 155 - cat_run
> 29 - cfg_run_cm
> 1688 - local_runcj
> 959 - cfg_util
> 703 - MenuFileRun_Callback
> 95 - gui_mainfcn
> 53 - cfg_ui
>------------------------------------------------------------------------
>
>Print 'Graphics' figure to:
> ...
>Failed 'CAT12: Segmentation'
>Error using &
>Number of array dimensions must match for binary array op.
>In file "...\spm12\toolbox\cat12\cat_main_cleanup.m" (???), function "cat_main_cleanup" at line 59.
>In file "...\spm12\toolbox\cat12\cat_main.m" (v1053), function "cat_main" at line 1012.
>In file "...\spm12\toolbox\cat12\cat_run_job.m" (v1052), function "cat_run_job" at line 614.
>In file "...\spm12\toolbox\cat12\cat_run_newcatch.m" (???), function "cat_run_newcatch" at line 13.
>In file "...\spm12\toolbox\cat12\cat_run.m" (v1040), function "run_job" at line 247.
>In file "...\spm12\toolbox\cat12\cat_run.m" (v1040), function "cat_run" at line 155.
>
>The following modules did not run:
>Failed: CAT12: Segmentation
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