Dear Claudia,
sorry for the trouble. Please copy the attached file to your cat12 folder and try the preprocessing again.
Best,
Christian
On Wed, 5 Oct 2016 11:43:42 +0100, Claudia Piervincenzi <[log in to unmask]> wrote:
>Dear all,
>
>I'm using the latest version of CAT12 r1012 (2016-09-19) and MATLAB version R2011b
>
>When I try to run the first module of preprocessing (Segment longitudinal data) I get the following error message:
>
>------------------------------------------------------------------------
>Running job #1
>------------------------------------------------------------------------
>Running 'Segment longitudinal data'
>
>
>------------------------------------------------------------------------
>Running job #2
>------------------------------------------------------------------------
>Running 'Longitudinal Rigid Registration'
>Estimated noise sd for "D:\prova_qmt_t1\MB12_T0.nii,1" = 10.2649
>Estimated noise sd for "D:\prova_qmt_t1\MB12_T1.nii,1" = 9.40958
>Estimated noise sd for "D:\prova_qmt_t1\MB12_T2.nii,1" = 9.95733
>APP:
> Initialize 5s
> Estimate background 3s
> Initial correction 8s
> Refine background 5s
> Final correction 7s
> Background correction 1s
> Final scaling 4s
> 57s
>Failed 'Longitudinal Rigid Registration'
>Error using &
>Matrix dimensions must agree.
>In file "C:\spm12\toolbox\cat12\cat_vol_groupwise_ls.m" (???), function "cat_vol_groupwise_ls" at line 276.
>In file "C:\spm12\toolbox\cat12\cat_vol_series_align.m" (???), function "cat_vol_series_align" at line 31.
>
>No executable modules, but still unresolved dependencies or incomplete module inputs.
>The following modules did not run:
>Failed: Longitudinal Rigid Registration
>Skipped: CAT12: Segmentation
>Skipped: CAT12: Segmentation
>Skipped: Apply deformations (many images)
>Skipped: Move/Delete Files
>Skipped: Longitudinal Rigid Registration
>Skipped: CAT12: Segmentation
>Skipped: CAT12: Segmentation
>Skipped: Apply deformations (many images)
>Skipped: Move/Delete Files
>
>Failed 'Segment longitudinal data'
>Error using MATLABbatch system
>Job execution failed. The full log of this run can be found in MATLAB command window, starting with the lines (look for the line showing the exact #job as displayed in this error message)
>------------------
>Running job #2
>------------------
>
>
>The following modules did not run:
>Failed: Segment longitudinal data
>
>
>
>
>I tryed with different set of images (from different scanners) and I always get the same error.
>Thank you in advance for your help!
>
>Best,
>
>Claudia
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