Hi Experts,
I am sorry for a basic question. I couldn’t find an answer in the forum.
This is my first time analyzing resting-state data using melodic “Multi-session temporal concatenation”.
I would like to compare my ICs to reference networks. I was told to use “fslcc.”
My first question is how to determine an appropriate r-value threshold for this fslcc command (says for p < .05), so that I can feed in to –t option with something like this (without path):
fslcc –noabs –p 3 –t <value> referenceNetworks.nii.gz melodic_IC.nii.gz
My second question is whether we should add a mask (e.g., adding -m mask.nii.gz from my .gica folder). So we have something like this (without path):
fslcc –noabs -m mask.nii.gz –p 3 –t <value> referenceNetworks.nii.gz melodic_IC.nii.gz
Thank you so much for your time,
Narun
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