Dear Mark,
Thank you for your advice. My cohort is between 4.5 to 10.5 years, and I have created a template for that specific age range with TOM.
I have tried to do the registration with different options (with and without BBR, by using 6DOF; with my template and with yours). Unfortunately none of these worked optimally (see example subject in link : https://www.dropbox.com/sh/m0xe4493lzzpev2/AAAtNLwDsnzqGGZmHwHdxV5Aa?dl=0) but I think that the BBR with my template may be the best of those. I am not sure if the registration is so bad that I should go in manually, what is your opinion based on the example pictures that I sent? Also, if I use my template, then in the non linear step is your config file used or not (ps. my template is 1mm)? Also, should I change the default warp resolution (10mm)?
Thank you again for helping me with this,
Best wishes,
Maria
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