Hello,
I am attempting to do the vertex analysis in FSL. When I run:
first_utils --vertexAnalysis --usebvars -i R_Hipp_ARR.bvars -d Matrix.mat -o RHIPALL --useReconNative --useRigidAlign
I receive the following error:
Attempting to switch to: /usr/local/fsl
Not a vtk file (error in line 1).
Not a vtk file (error in line 1).
I am running the latest version of FSL and everything is located in the /usr/local/fsl path as it should be.
When I open concatenated.bvars in a text editor I only see:
This is a bvars file
NumberOfSubjects 28
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
The error for first_utils only appears when I enter "--usebvars"; otherwise when I run the command line, no output file is created, but no error message is generated.
Any suggestions?
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