Hi
AutoPtx is a plugin, meaning it is not part of FSL and you have to install it on top of FSL. Once you do that, the website that I pointed you at is all you need, it is pretty straightforward to run.
Good luck
Stam
> On 2 Jun 2016, at 08:31, SUBSCRIBE FSL lijen <[log in to unmask]> wrote:
>
> Hi Stam
>
> Thank you for your assistance!
> I still have some question ahout autoPtx.
> Are the " autoPtx_1_preproc", "autoPtx_2_launchTractography" and "fsl_sub" commands that type in terminal will conduct
> or they conduct with probabilistic tracking of fdt?
> I try to type autoPtx_1_preproc in terminal but show a wrong message "coomand not found".
> Do I choose the target image in autoPtx protocol floder in Optinal Targets block if they conduct with probabilistic tracking of fdt ?
> I use probabilistic tracking in subject native space not in MNI space but the images of autoPtx protocol floder are in MNI space.
> I try to use the "autoPtx" but I don't understand how to use clearly.
> May I ask any webpage introduce the instruction of autoPtx?
> Thank you!
>
> Best regard,
> Li-Jen
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