Hello all,
When running "tbss_1_preproc *.nii.gz" on Mac OS X, the resulting FA images have white (value 1) rather than black (value 0) background.
Did anybody encounter this bug? How do I solve it? Is there an easy way to change the background back to black? If I keep the background white, the follow-up tbss steps do not give correct results.
I'm attaching screenshots of the original FA image and the result after running "tbss_1_preproc *.nii.gz". Operating system is OS X Yosemite 10.10.5
To verify that the original FA images are not the problem, I re-ran "tbss_1_preproc *.nii.gz" on a Linux machine. The proper results are attached (coronal view not shown due to message size limit). Linux version is Kubuntu 14.04.1
Thanks ahead,
Oren
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Oren Civier, PhD
Neurolinguistics Lab
Gonda Multidisciplinary Brain Research Center
Bar-Ilan University
Google Hangouts: [log in to unmask]
Australian mobile: 0481185102
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