Dear all,
We would like to provide a section of an unbiased electron density map to illustrate de correctness of a ligand conformation.
What shall we do using CCP4?. Do I have to recalculate the electron density after the first round of refinement just after the molecular replacement?.
This could be useful but the model is isomorphous and also contains a similar ligand, so even if I delete it the protein structure would be "affected" by the ligand.
Thank you for your suggestions in advance
Armando
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