Dear Cristina,
The order of columns in STAR files isn't fixed, but it is always
determined in the header. You could use awk to re-order columns. The
next version of relion will have a utility to join STAR files together
as well. (But that will probably not be released until after summer)
HTH,
Sjors
On 02/15/2016 09:22 AM, Cristina Paulino wrote:
> Dear all,
>
> I have noticed that the order of variables in the output star file of ctf4find varies.
> Sometimes the output has the order: _rlnMicrographName #1, rlnCtfImage #2, etc and sometimes the order: _rlnVolatge #1, _rlnDefocusU #2, etc
> I’ve haven’t yet figured out a pattern to predict which output I will get when, yet. Is it random?
> The problem is that I often merge those micrograph star files originated from different data collection days. However, obviously I can’t do it if the star header is not identical.
>
> Any experience with this?
> Cristina
>
>
--
Sjors Scheres
MRC Laboratory of Molecular Biology
Francis Crick Avenue, Cambridge Biomedical Campus
Cambridge CB2 0QH, U.K.
tel: +44 (0)1223 267061
http://www2.mrc-lmb.cam.ac.uk/groups/scheres
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