Hi all
When I used the bet command to do the brain extraction, I got some errors as follows.
But I do not know what is the cause of the errors.
I can still get the result. The brain extraction of some cases look fine
but some don't. Especally when I dealed with some cases with severe pathology,
the results show some big holes in the brain.
opt/fsl/bin/standard_space_roi: 1: /opt/fsl/bin/standard_space_roi: dc: not found
/opt/fsl/bin/standard_space_roi: 1: /opt/fsl/bin/standard_space_roi: dc: not found
/opt/fsl/bin/standard_space_roi: 1: /opt/fsl/bin/standard_space_roi: dc: not found
/opt/fsl/bin/standard_space_roi: 1: /opt/fsl/bin/standard_space_roi: dc: not found
/opt/fsl/bin/standard_space_roi: 1: /opt/fsl/bin/standard_space_roi: dc: not found
/opt/fsl/bin/standard_space_roi: 1: /opt/fsl/bin/standard_space_roi: dc: not found
Error: no output filename specified!
Image Exception : #22 :: ERROR: Could not open image data_wangbb_tmp_unbiased_forskull_reduced_tmp_standard_mask
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
Aborted (core dumped)
Cannot open volume data_wangbb_tmp_unbiased_forskull_reduced_tmp_standard_mask_to_in for reading!
Image Exception : #22 :: ERROR: Could not open image data_wangbb_tmp_unbiased_forskull_reduced_tmp_standard_mask_to_in
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
Aborted (core dumped)
Image Exception : #22 :: ERROR: Could not open image data_wangbb_tmp_unbiased_forskull_reduced
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
Aborted (core dumped)
/opt/fsl/bin/standard_space_roi: 1: /opt/fsl/bin/standard_space_roi: dc: not found
/opt/fsl/bin/standard_space_roi: 1: /opt/fsl/bin/standard_space_roi: dc: not found
/opt/fsl/bin/standard_space_roi: 1: /opt/fsl/bin/standard_space_roi: dc: not found
/opt/fsl/bin/bet: 1: /opt/fsl/bin/bet: dc: not found
/opt/fsl/bin/bet: 244: [: -gt: unexpected operator
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