On 25/11/2014 20:45, ÀîÖǺ£ wrote:
> Hello,
> I have met a problem when I performed real-space refine handling with
> COOT software from Phenix. It did not show the surrounding clashes of
> the refined atoms so that I can not see whether the refining is
> appropriate. The tool Probe-clashed in Validate works fine, but it
> shows the global clashes of the whole molecule and it¡¯s not realtime.
>
It used to be the case that Coot updated the local probe dots locally
after a (Coot) refinement. I have not tried this in a long time however
and never with the Phenix interface.
I will make a note to review this.
Paul.
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