On 19/05/15 11:55, Mohammad Khan wrote:
> Dear all,
>
> I have added hydrogens on my molecule using the Refmac option in Coot.
> I now want to remove them. I tried various syntax but they didn't
> work. Is there a simple way to remove them from the pdb?
This will create a new molecule that is a copy of molecule number 0
without hydrogens:
(new-molecule-by-atom-selection 0 "//*//*[!H]")
>
> Moreover, if I do my refinemnets with hydrogens in it, will it affect
> my results, other than maybe slowing down the process.
If you use hydrogens in refinement then no (or not much).
Paul.
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