Hi,
I have a 3D matrix in MATLAB which I need to convert to NIfTI or ANALYZE format so as to view it in SPM8. For this I am using "Tools for NIfTI and ANALYZE image by Jimmy Shen" available on http://in.mathworks.com/matlabcentral/fileexchange/8797-tools-for-nifti-and-analyze-image. My problem is once I convert this 3D matrix to ANALYZE format using make_ana command, I get the brain volume that is rotated/flipped w.r.t the original volume.
HOw can I resolve this?
NOTE: co-registering this to original brain volume did not help, the result was still flipped.
Thanks,
Janki
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