Hi Anderson,
Thank you for your answer. I used 500 permutations for FWE-correction and FDR. Is 500 not enough for permutation test? (I am not that good at statistics. I just followed a Powerpoint guideline that my co-worker made before.
I will try 5k or 10k permutations for FWE-correction and FDR this time.
I really appreciate your advice!
Jason
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