Dear David,
mrtailor-gui
(http://shelx.uni-ac.gwdg.de/~tg/research/programs/mrtailor/) might do
this if you have the sequence file in clustalx format, although I have
not tested mrtailor w.r.t. insertion code due to lack of an example. If
you cannot get it to work, I would not mind to use your PDB file to
improve the program, if you wouldn't mind sending it.
Best,
Tim
On 05/22/2014 06:34 PM, Hargreaves, David wrote:
> Dear CCP4bb,
>
> Does anyone know a simple way to get rid of residue number insertion codes and then renumber residues normally in pdb files?
>
> Help much appreciated,
>
> David
>
>
> David Hargreaves
> Associate Principal Scientist
> _____________________________________________________________________
> AstraZeneca
> Discovery Sciences, Structure & Biophysics
> Mereside, 50F49, Alderley Park, Cheshire, SK10 4TF
> Tel +44 (0)01625 518521 Fax +44 (0) 1625 232693
> David.Hargreaves @astrazeneca.com<mailto:[log in to unmask]>
>
> Please consider the environment before printing this e-mail
>
>
> --------------------------------------------------------------------------
> AstraZeneca UK Limited is a company incorporated in England and Wales with registered number: 03674842 and a registered office at 2 Kingdom Street, London, W2 6BD.
> Confidentiality Notice: This message is private and may contain confidential, proprietary and legally privileged information. If you have received this message in error, please notify us and remove it from your system and note that you must not copy, distribute or take any action in reliance on it. Any unauthorised use or disclosure of the contents of this message is not permitted and may be unlawful.
> Disclaimer: Email messages may be subject to delays, interception, non-delivery and unauthorised alterations. Therefore, information expressed in this message is not given or endorsed by AstraZeneca UK Limited unless otherwise notified by an authorised representative independent of this message. No contractual relationship is created by this message by any person unless specifically indicated by agreement in writing other than email.
> Monitoring: AstraZeneca UK Limited may monitor email traffic data and content for the purposes of the prevention and detection of crime, ensuring the security of our computer systems and checking Compliance with our Code of Conduct and Policies.
>
--
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
|