Hi,
I'm trying to run bedpostx on the HCP data, but for some reason it
doesn't process any slices. The command I used:
bedpostx /hcp_data/100307/T1w/Diffusion --nf=3 --fudge=1 --bi=1000
--model=2 -g -c
It gives the following output:
subjectdir is /hcp_data/100307/T1w/Diffusion
Making bedpostx directory structure
Queuing preprocessing stages
Queuing parallel processing stage
0 slices processed
Queuing post processing stage
and the following files are created:
data_slice_0000.nii.gz
...
data_slice_0144.nii.gz
nodif_brain_mask_slice_0000.nii.gz
...
nodif_brain_mask_slice_0144.nii.gz
Does anyone know what I'm missing?
Best,
Martin
PS: I'm using FSL 5.0.6 on CentOS 6
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