All we are using is files downloaded last week in one go from the fix
web site, so I don't think version mismatch could be the problem.
Ah - although I couldn't find the .fix.log file, it did make me look
for hidden files and I found the .fix_2b_predict.log which has the
following R error:
Error in library(party) : there is no package called 'party'
Execution halted
I think I might have found the problem. Will get that package
installed and try again.
-Tom
On 19 March 2014 16:23, Eugene Duff <[log in to unmask]> wrote:
> Also, try checking the fix/logMatlab.txt and .fix.log files
>
> Cheers
>
>
> --
>
>
> On 19 March 2014 16:22, Stephen Smith <[log in to unmask]> wrote:
>>
>> Hi - is it possible you're mixing up training files from 1.05 and training
>> methods from 1.06, etc?
>> Cheers.
>>
>>
>>
>> On 19 Mar 2014, at 16:15, Tom Johnstone <[log in to unmask]>
>> wrote:
>>
>> We're trying to use fix to clean up data processed using feat.
>>
>> We are running it on a 1st level feat directory using the supplied
>> Standard training set, and get the following output:
>>
>> fix AF1.feat /usr/local/fix/training_files/Standard.RData 20
>> FIX Feature extraction for Melodic output directory: AF1.feat
>> create edge masks
>> run FAST
>> registration of standard space masks
>> extract features
>> FIX Classifying components in Melodic directory: AF1.feat using training
>> file: /usr/local/fix/training_files/Standard.RData and threshold 20
>> No valid labelling file specified
>>
>> There is no file created in the AF1.feat directory. There are files
>> created in the AF1.feat/fix and AF1.feat/mc directories.
>>
>> Any idea what might be going wrong and where to look for clues?
>>
>>
>>
>>
>> ---------------------------------------------------------------------------
>> Stephen M. Smith, Professor of Biomedical Engineering
>> Associate Director, Oxford University FMRIB Centre
>>
>> FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
>> +44 (0) 1865 222726 (fax 222717)
>> [log in to unmask] http://www.fmrib.ox.ac.uk/~steve
>>
>> ---------------------------------------------------------------------------
>>
>> Stop the cultural destruction of Tibet
>>
>>
>>
>>
>
--
Centre for Integrative Neuroscience & Neurodynamics
School of Psychology and CLS
University of Reading
Ph. +44 (0)118 378 7530
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