Hi,
Yes, I could see the illustrations that you provided but it wasn't enough to know what was really happening.
This is why I asked you to upload the relevant nifti data (input image, output image and lesion mask) to the following:
https://oxfile.ox.ac.uk/oxfile/work/extBox?id=68312615463381F4C
All the best,
Mark
On 26 Feb 2014, at 16:32, "Archer,Derek B" <[log in to unmask]> wrote:
> Hello Mark,
>
> I was wondering if you noticed the distortions I have been seeing in my fnirt results. Do you have any ideas of what could be causing this?
>
> Thanks as always,
> Derek
>
> -----Original Message-----
> From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf Of Derek Archer
> Sent: Thursday, February 13, 2014 10:33 AM
> To: [log in to unmask]
> Subject: Re: [FSL] FNIRT Distortions
>
> Hi Mark,
>
> Sorry about that! It is working now. Here is the link: http://archerdb.imgur.com/
>
> Thanks,
> Derek
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