Hi FSL experts,
So I want to have all my DTI images to be oriented in a similar way. I know I could use fslreorients2std to do so, however I don't know at what stage I should execute this command due to additional information the DWIs have (bvecs, bvals, etc...).
Should I apply this after dtifit in the type of diffusivity marker I will use ?
Any ideas, suggestions?
thanks,
Rodrigo
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