-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Dear Faisal,
it is not a server, but you can use lsqman (G. Kleywegt) for this with
the following three lines typed at the prompt:
re m1 file1.pdb
re m2 file2.pdb
rmsd_calc m1 A1-999 m2 A1
You could also align the molecules in coot, it will print the numbers
(and more interesting information) in the terminal you started coot from.
Regards,
Tim
On 12/20/2013 03:12 PM, Faisal Tarique wrote:
> Dear all
>
> Can anybody please tell me if there is any sever where i can find
> RMSD and no of C alpha of the two structures which were aligned
> manually in PYMOL..
>
> really apologize for asking off topic question..
>
> thanks in advance
>
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Icedove - http://www.enigmail.net/
iD8DBQFStFJNUxlJ7aRr7hoRAgNCAKCw1YX5oziN2+NvxpNh93j2+XygtgCfVOFl
5ZhfSEsMuZ4W+10lnW4gQzg=
=34uJ
-----END PGP SIGNATURE-----
|