Hi,
I'm not sure what you mean by my modification of FNIRT. Can you be more specific?
As for the error - it looks like it cannot find the template image. If you are using a Debian/Ubuntu platform then you should check that you have a full installation of FSL, as it is possible to get an installation on these platforms that does not include the atlases.
All the best,
Mark
On 26 Nov 2013, at 12:40, Priya Shan <[log in to unmask]> wrote:
> Hello,
> My current work is on cerebellar volume analysis.
> Using FNIRT (Mark Jenkinson's modifcation). Registering T1 structural to MNI152
>
> The first step of the above programme was fine.
>
> However for the 2nd step (flirt): I keep getting an error message that reads:
>
> Image Exception : number 22: error : could not open image
> MNI152_T1_2mm_brain libc++abi.dylib: ermine called throwing an
> exception abort trap 6
>
> Can you help?
>
> Thanks
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