Hi,
I just installed the cutting edge distribution (http://starlink.jach.hawaii.edu/starlink/rsyncStarlink) on MacOSX 10.8 and tried to reduce some old HARPS data using ORACDR. I'm trying to reduce an old grid mode HARPS data (http://www1.cadc-ccda.hia-iha.nrc-cnrc.gc.ca/data/pub/JCMT/a20080221_00066_01_0001) with the following command:
oracdr -file file_list.txt -loop file -batch -skip -nodisplay -onegroup -log sf -cal REDUCE_SCIENCE_NARROWLINE
where file_list.txt only includes the mentioned above file. Unfortunately I get the following error message:
ORAC-DR Says: No display will be used
ORAC-DR Says: Pre-starting mandatory monoliths...Done
Checking for next data file: ../rawdata/a20080221_00066_01_0001.sdf
Storing: a20080221_00066_01_0001
A new group 20080221#66#1 has been created
Sorting Groups
REDUCING: a20080221_00066_01_0001
Using recipe REDUCE_SCIENCE_NARROWLINE provided by the frame
#66 Warning: BASEC1 header not defined in file. Using TCS_TR_BC1 from JCMTSTATE structure. Setting BASEC1 to 246.631666666667
#66 Warning: BASEC2 header not defined in file. Using TCS_TR_BC2 from JCMTSTATE structure. Setting BASEC2 to -24.4144444444444
#66 Warning: TRACKSYS header not defined in file. Using TCS_TR_SYS from JCMTSTATE structure. Setting TRACKSYS to J2000
Observing Mode: HARP / grid / pssw
Determining MAKECUBE parameters for GRID.
Determining parameters for output cube...done.
Creating cube from a20080221_00066_01_raw0001...done.
1 cube formed: a20080221_00066_01_cube001
Sorting time-series data in time order...
a20080221_00066_01_raw0001 to a20080221_00066_01_ts001:
Sorted time slices in increasing time.
Masked detectors H03,H14.
Generated variance array based on Tsys values.
Receptors disabled by the calibration system:
Check that receptors have non-bad data.
Receptor H00 is valid.
Receptor H01 is valid.
Receptor H02 is valid.
Receptor H04 is valid.
Receptor H05 is valid.
Receptor H06 is valid.
Receptor H07 is valid.
Receptor H08 is valid.
Receptor H09 is valid.
Receptor H10 is valid.
Receptor H11 is valid.
Receptor H12 is valid.
Receptor H13 is valid.
Receptor H15 is valid.
Determine spectra exhibiting transient high-frequency noise interference in a20080221_00066_01_ts001.
Receptors disabled by the calibration system:
Receptor H00.
Computing squared Laplacian of spectra.
Collapsing spectra to form average edge detection per spectrum.
Correcting for glitches or drift in the edginess profile.
Turning off spectra with rms edginess above 0.0115
No spectra removed out of 300.
Expand the masked profile.
Paste the masked data into the cube mask.
---------------
--------------- Similar messages regarding other receptors have been ommited
---------------
Receptor H15.
Computing squared Laplacian of spectra.
Collapsing spectra to form average edge detection per spectrum.
Correcting for glitches or drift in the edginess profile.
Turning off spectra with rms edginess above 0.0093
No spectra removed out of 300.
Expand the masked profile.
Paste the masked data into the cube mask.
Apply the mask of noisy spectra to the input time series to form a20080221_00066_01_hfimasked001.
!! Error reading file names from stream attached to shell process -
! Interrupted system call
!! No files found matching the file specification
! '/Users/jpineda/science/JCMT/HARP/Oph_H2D+/cube_recipe/adam_61767/ndfpack
! _mon'.
!! HDS_OPEN: Error opening an HDS container file.
#66 Err: Error in pipeline
Recipe took 53.991 seconds to evaluate and execute.
#66 Err: Recipe completed with error status = 147358675
#66 Err: Continuing but this may cause problems during group processing
Pipeline processing complete
Processed one recipe which completed with an error
Exiting...
ORAC-DR Says: Goodbye
Will be exiting with bad status
Do you have any ideas of how this can be fixed? I also tried processing other files of the same run getting similar messages and a group of these files getting the same result.
Cheers,
Jaime
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