Resurrecting this thread:
I decided to re-run all my analysis using B0 correction AND 2-step registration ([68mm slab EPIs] --(6df)--> [whole-brain EPI] --(BBR)--> [MPRAGE]), but I'm still having problems with that.
If I do either one of the following, the activation maps I get are sensible:
1. B0 correction, [68mm slab EPIs] --(BBR)--> [MPRAGE]
2. NO B0 correction, [68mm slab EPIs] --(6df)--> [whole-brain EPI] --(BBR)--> [MPRAGE]
However, if I try to perform both the B0 correction and the 2-step registration, my activation maps end up blank.
Also, FYI, no errors show up in the log file.
Any thoughts on why this might be happening?
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