Hi Sjors and all,
I am trying to use ./Relion_make_orientational_contrib.sh but do not
really understand how:
after relion has converged I have the following files:
C1_it018_data.star
C1_it018_half2_class001.mrc
C1_it018_half1_class001.mrc
C1_it018_half2_model.star
C1_it018_half1_model.star
C1_it018_sampling.star
C1_half2_class001_unfil.mrc
C1_half1_class001_unfil.mrc
C1_data.star
C1_class001.mrc
C1_model.star
C1_sampling.star
So, if I understand correctly, I should run
"./Relion_make_orientational_contrib.csh C1 18"
I get:
"grep: C1_it018_model.star: No such file or directory
done! Use UCSF Chimera to visualise the BILD files (you may need to
change the origins of your maps in the Volume Viewer window"
why does it need the last iteration? There will never be a
"C1_it018_model.star" because there is two with "half1" and "half2" and
one without the iteration number When omitting the "18" I get other
error messages...
I prefer to ask before I start to rename files etc...
Thanks a lot for help, Dieter
--
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Dieter Blaas,
Max F. Perutz Laboratories
Medical University of Vienna,
Inst. Med. Biochem., Vienna Biocenter (VBC),
Dr. Bohr Gasse 9/3,
A-1030 Vienna, Austria,
Tel: 0043 1 4277 61630,
Fax: 0043 1 4277 9616,
e-mail: [log in to unmask]
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