Hey folks,
i'm trying to re-calculate the mean displacement from the mcflirt output/report using rmsdiff. So I scripted a simple bash loop trough mcflirt's mat-files but those results largely differ from the reported mean displacement..
Basically the calculates rmsdiff mat(i) mat(i+1) refvol
What am I doing wrong? Am I missing some sort of normalization or something?
Best regards
Michael
|