Hello,
Please excuse me if this question is naive, but I am attempting to run a dual_regression analysis on my two groups. After I type in the command below--
dual_regression resting_state.gica/groupmelodic.ica/melodic_IC 1 /home/fsl/Desktop/restingstateGLM.mat /home/fsl/Desktop/restingstateGLM.con 5000 dual_regress_results $(cat /home/fsl/Desktop/resting_state.gica/.filelist)
the script spits out --
creating common mask
doing the dual regressions
sorting maps and running randomise
wc: dual_regresspleasegod3/scripts+logs/drD: No such file or directory
The masks are created and when it says "doing the dual regressions" it does creat the drA, drB, and drC files, but when I look into the scripts+logs folder for some reason all of the drC.eXXXX.X files in this folder read the message:
Could not open matrix file resting_state.gica/groupmelodic.ica/melodic_IC
ols_dof: Error in determining the trace, resorting to basic calculation
ols_dof: Error in determining the trace, resorting to basic calculation
Cannot open volume dual_regresspleasegod1/dr_stage2_subject00000 for reading!
Is this a problem with my GLM file? I can't find anything in the forum talking about this problem. For reference my .mat and .con files are below;
.mat --
/NumWaves 2
/NumPoints 39
/PPheights 1.000000e+00 1.000000e+00
/Matrix
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
1.000000e+00 0.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
0.000000e+00 1.000000e+00
.con --
/ContrastName1 group A > group B
/ContrastName2 group B > group A
/ContrastName3 group A mean
/ContrastName4 group B mean
/NumWaves 2
/NumContrasts 4
/PPheights 1.000000e+00 1.000000e+00 1.000000e+00 1.000000e+00
/RequiredEffect 1.384 1.384 0.966 0.991
/Matrix
1.000000e+00 -1.000000e+00
-1.000000e+00 1.000000e+00
1.000000e+00 0.000000e+00
0.000000e+00 1.000000e+00
Is anything blatantly wrong with my .mat or .con files?? Thank you for your time
Bennis
|