Hi Luke,
From the log, it looks like you haven't set a target image for the
registration?
> Registration
> /bin/mkdir -p /Users/luke/Desktop/FSL/feeds/results/fmri.feat/reg
>
>
> /usr/local/fsl/bin/fslmaths /Users/luke/Desktop/FSL/feeds/data/structural_brain highres
>
>
> /usr/local/fsl/bin/fslmaths /usr/local/fsl/data/standard/MNI152_T1_2mm_brain standard
>
> Error: you have not selected any images to register to!
Le 12.03.13 16:44, Luke a écrit :
> Sorry ... I have accidentally send only the log file!
>
> I have tried to install fsl 5.0.2.2 on three MAC's (manual install). Running feeds, I do get error messages on system at the "FEAT-stage".
> System: MacBook Pro, OSX 10.8.2, os = Darwin Yodas-MacBook-Pro.local 12.2.1 Darwin Kernel Version 12.2.1: Thu Oct 18 12:13:47 PDT 2012; root:xnu-2050.20.9~1/RELEASE_X86_64 x86_64
>
> The terminal output at the critical FEAT stage looks at follows:
> .
> .
> .
>
> checking error on thresholded Z stat images:
> % error = 0.38
> % error = 0.37
> % error = 0.39
> checking error on registration images:
> No output image created
> Warning - test failed!
> No output image created
> Warning - test failed!
> checking error on position of largest cluster of Talairached zfstat1:
> couldn't open "/Users/luke/Desktop/FSL/feeds/results/fmri.feat/cluster_zfstat1_std.txt": no such file or directory
> while executing
> "open ${FEEDSDIR}/results/fmri.feat/cluster_zfstat1_std.txt r"
> invoked from within
> "if { $feeds(feat) } {
>
> puts "\nStarting FEAT at [ exec date ]"
>
> # fix FEAT setup file to use FEEDSDIR and FSLDIR
> fsl:exec "cp ${FEEDSDIR}/data/fmri.fe..."
> (file "./RUN" line 285)
> 525.23 real 504.70 user 20.80 sys
>
> Does anybody have an idea how to fix it?
>
> Many thanks in advance,
>
> Luke
>
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