Hi Mark,
thank you very much. After re-running FIRST and concat_bvars I have this error when first_utils is performed:
read model
done reading model
setting up shape/appearance model
The shape has 642 vertices.
336 modes of variation are retained.
The model was constructed from 336 training subjects.
model loaded
read model
done reading model
setting up shape/appearance model
The shape has 642 vertices.
336 modes of variation are retained.
The model was constructed from 336 training subjects.
0.888222 0.0409998 0.00113172 5.39015
-0.055766 1.01588 -0.00288499 3.71056
0.00242782 0.0216573 1.08002 -7.69876
0 0 0 1
0.971938 0.00591658 -0.00537371 3.25552
-0.00606718 1.047 -0.0340152 -3.95198
0.00551558 0.0349079 1.02038 -5.61019
0 0 0 1
0.967396 0.00522294 -0.0100509 3.65032
-0.004844 0.991157 -0.0627658 3.51176
-0.00317755 0.0675314 1.02921 -9.99123
0 0 0 1
0.964321 0.0246201 -0.00998907 0.20971
-0.0309455 1.07186 0.00592125 -6.18237
0.00432946 0.00887638 1.02066 -2.61742
0 0 0 1
0.931385 0.0334142 -0.00269341 2.5672
-0.0359578 1.06982 0.0864246 -10.063
-0.00922166 0.000919805 1.10288 -5.01715
0 0 0 1
0.964328 0.0648903 -0.0249661 -1.39879
-0.0746754 0.955637 -0.0532599 14.6977
0.0179626 0.0577041 1.00052 -9.40132
0 0 0 1
0.987893 0.0121677 -0.0141194 0.213901
-0.0129107 1.01211 0.000416107 -1.56301
0.0120561 -0.00164759 1.02979 -0.335803
0 0 0 1
0.915545 0.0213083 -0.0114439 5.7422
-0.0349306 1.02858 0.0839098 -8.5911
-0.00159977 -0.0294168 1.05164 -2.01161
0 0 0 1
0.916869 0.0202274 -0.0145792 5.25113
-0.0395392 0.985849 -0.0244939 5.8821
-0.010896 0.0685829 1.10073 -10.6785
0 0 0 1
0.949676 0.0105015 -0.0142564 4.8853
-0.0135245 1.00937 -0.0227834 1.42311
-0.00232661 -0.0162446 1.0121 1.60615
0 0 0 1
0.890556 0.032213 -0.023861 7.26298
-0.0289178 0.989745 -0.0438574 6.30409
-0.00137263 0.082163 0.994435 -6.68414
0 0 0 1
0.865815 0.0152112 -0.0431103 15.0645
-0.0170809 1.10421 0.0206853 -10.3791
0.0135885 0.0555157 1.12811 -19.8715
0 0 0 1
0.894143 0.00433363 -0.0386494 10.6873
-0.00764163 1.02644 0.0313415 -3.23775
0.0145401 0.0105469 1.10331 -7.63895
0 0 0 1
0.921237 0.0286797 0.00179682 4.61241
-0.0391555 1.0571 0.0411604 -3.14605
-0.0174141 0.00138536 1.06508 -5.73464
0 0 0 1
0.938109 0.0435942 -0.0161472 0.520018
-0.0479703 0.957512 0.031864 5.5983
0.0166136 -0.0110838 1.02568 0.354804
0 0 0 1
0.913701 0.0246812 0.00776246 4.40542
-0.0331317 1.08332 0.0790335 -9.51721
-0.0212623 -0.0203238 1.04684 -0.317802
0 0 0 1
0.877997 -0.012763 0.00226839 11.4395
0.0021785 1.08649 0.0415906 -10.3746
-0.00322088 -0.000806413 1.10482 -5.34627
0 0 0 1
0.832069 -0.0218768 -0.0254296 18.5148
-0.0436785 1.21032 0.0156129 -20.8782
0.0189554 0.147157 1.14234 -28.6771
0 0 0 1
0.894064 0.036027 -0.0310923 7.04933
-0.0492158 1.06738 0.0277023 -2.17281
0.0205514 0.0324239 1.10015 -9.57825
0 0 0 1
0.930644 0.0346151 -0.0154428 2.87064
-0.0366286 1.01748 0.036454 0.882019
0.00370264 -0.0342371 1.01545 -2.6658
0 0 0 1
0.900515 -0.00261935 -0.00408389 10.0336
0.000505723 1.03174 -0.0143532 -0.1842
-0.00831533 0.0587749 1.16109 -16.2387
0 0 0 1
0.933168 0.0157297 -0.0184263 5.40872
-0.0266759 1.03589 -0.0206444 2.69699
0.0143876 0.020236 1.05996 -7.15053
0 0 0 1
0.873351 0.0446217 -0.00279811 6.40032
-0.0657909 1.04014 -0.0509667 3.46554
-0.0187519 0.110474 1.12038 -17.7174
0 0 0 1
0.970866 0.00956674 -0.00643393 1.15921
-0.0210548 1.03022 -0.00794986 -3.07142
-0.0104876 -0.00803778 1.0298 0.304735
0 0 0 1
0.941512 0.00637082 -0.00351298 5.5115
0.000766735 0.995606 0.109009 -6.79079
0.00832474 -0.0984029 1.00073 8.01352
0 0 0 1
0.961707 0.0135736 -0.0020558 2.08195
-0.0241865 1.05971 -0.0122501 -3.13761
-0.0150581 0.0501128 1.13789 -10.4242
0 0 0 1
0.875956 0.0589321 -0.0078533 6.20349
-0.0623179 0.99187 -0.0273431 7.19124
0.00382501 0.0289989 0.99446 -4.09457
0 0 0 1
done recon
done recon and reg
new design matrix
1 -1.11111
1 -1.11111
1 -1.11111
1 -1.11111
1 -1.11111
1 -1.11111
1 -1.11111
1 -1.11111
1 -1.11111
1 -1.11111
1 -1.11111
1 -1.11111
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
1 0.888889
Error: failed to open file shape_analyis/con1_dis2_R_Thal.nii.gz
Image Exception : #22 :: ERROR: Could not open image shape_analyis/con1_dis2_R_Thal
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
Thanks,
Stefano
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