I am not entirely sure what you want to do. If you have a target space (e.g. MNI space), then you can register to this space...Look at flirt/fnirt usage and relevant examples on the online documentation.
On 29 Nov 2012, at 10:07, Claudia Piervincenzi wrote:
> I had already met this script ...
> what I was wondering is how arbitrarily change the orientation of the DTI file (therefore all volumes) with FSL, so you can see perfectly straight the brain (corpus callosum on the midline).
>
|