Hi,
You could let FEAT do the registration and have a look the logs.
Cheers,
Klaus
On Tue, Sep 25, 2012 at 11:35 AM, Alejandro Vicente Grabovetsky
<[log in to unmask]> wrote:
> Dear FSL,
>
> I'm having trouble figuring out how to use the BBR method since the
> documentation seems to give conflicting and somewhat confusing info.
> I got as far as understanding that I need to use the flirt function with bbr
> cost functions, but one of the inputs for the BBR to work is the white
> matter segmentation (easy to obtain from FAST/FIRST or segment 8, etc.) and
> the white matter boundary coordinates and normals (I don't know where to get
> these). What function can I get these last 2 inputs from?
>
> I'd appreciate any help with this,
> Best!
> Sasha
>
>
> --
> Vicente Grabovetsky, Alejandro (Sasha)
> Postdoctoral researcher
> Donders Centre for Cognitive Neuroimaging
> http://www.doellerlab.com
>
>
>
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