If you want New Segment to ignore a region of an image when doing its
parameter estimation, you can set those voxels to zero. If you have
an MRIcron mask, you could zero the voxels in the image using ImCalc.
Best regards,
-John
On 26 July 2012 15:43, Rosalia Dacosta <[log in to unmask]> wrote:
> Dear SPM experts,
>
> I have a doubt about how to manage with injured brains.
>
> I am running New Segmentation...to do vbm...a have a group of brain injured
> subjects and I have done costfunction masking with MriCron, mask of the
> lesion and normalized the lesion to T1 image.
>
> Unfortunately, when running SPM8 I have not seen the possibility of
> co-registering every mask of the lesion of every subject to the T1 realigned
> image, so I suppose that New Segmentation is not going to take the lesion
> into account?
>
> Bets regards,
>
> Note: Thank you Guillaume for your helping. You have been very kind :)
>
> Rosalia.
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