Ah thanks, I've managed to get it sorted out.
In case anyone else has this issue, I downloaded the CCP4 source code, increased MAX3D in fsearch.f, and recompiled. I first built CCP4 (./configure && make) and then fsearch explicitly (cd src && make fsearch).
Thanks,
Jason.
--
Jason Busby
PhD Student
Laboratory of Structural Biology
School of Biological Sciences
University of Auckland
Thomas Building 110
3a Symonds St
Private Bag 92019
Auckland 1142
New Zealand
ph: +64 9 3737599 ext 84155
fx: +64 9 3737414
On 14/06/2012, at 9:17 AM, Pete Meyer wrote:
> Jason,
>
> It seems like you're on the right track - it's usually not a problem to increase array sizes and rebuild.
>
> How are you building (aka "cd $CCP4/src; make fsearch" or something else)? If you're calling the fortran compiler (or ld) directly, it looks like there's an a problem with the library options or search paths.
>
> Pete
>
> Jason Busby wrote:
>> Hi,
>> I am trying to run fsearch to do molecular replacement from a SAXS envelope, but it gives an error: FSEARCH: *out of allocated memory*
>> I assume this is because of my large unit cell: 133.9180 147.8250 274.7790 90.0000 90.0000 90.0000
>> Is it possible to increase the amount of memory available to fsearch? I have tried increasing MAX3D in the fsearch source, but could not get it to link on my system (ld: symbol(s) not found).
>> I'm running ccp4 6.2.0 on Mac OS X 10.6.8
>> Any help would be appreciated.
>> Thanks,
>> Jason.
>> --
>> Jason Busby
>> PhD Student
>> Laboratory of Structural Biology
>> School of Biological Sciences
>> University of Auckland
>> Thomas Building 110
>> 3a Symonds St
>> Private Bag 92019
>> Auckland 1142
>> New Zealand
>> ph: +64 9 3737599 ext 84155
>> fx: +64 9 3737414
>
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