Hello Christina,
The 4.1.0 version of FEEDS, which I believe should be compatible with 4.1.4, can be downloaded from:
http://www.fmrib.ox.ac.uk/fsldownloads/oldversions/fsl-4.1.0-feeds.tar.gz
Many Regards
Matthew
> Dear all,
>
> I hope someone can help me with FSL because FEEDS failed:
>
> christina@ubuntu:~/Desktop/feeds$ /usr/bin/time ./RUN all
>
> FSL Evaluation and Example Data Suite v4.1.9
>
> Warning - FSL version (4.1.4) not the same as this test
> suite version (4.1.9)! Therefore this test may
> not run...maybe you should download the latest version of
> the test suite and/or FSL.
>
> start time = Do 5. Apr 13:56:40 CEST 2012
> hostname = ubuntu
> os = Linux ubuntu 2.6.32-38-generic #83-Ubuntu SMP Wed Jan 4 11:13:04 UTC 2012 i686 GNU/Linux
>
>
> /bin/rm -rf /home/christina/Desktop/feeds/results ; mkdir /home/christina/Desktop/feeds/results
>
>
> Starting PRELUDE & FUGUE at Do 5. Apr 13:56:40 CEST 2012
> % error = 0.0
> % error = 0.0
>
> Starting SUSAN at Do 5. Apr 13:56:43 CEST 2012
> % error = 0.03
>
> Starting SIENAX (including testing BET and FLIRT and FAST) at Do 5. Apr 14:01:40 CEST 2012
> checking error on BET:
> % error = 0.0
> checking error on FLIRT:
> No output image created
> Warning - test failed!
> checking error on FAST:
> checking error on single-image binary segmentation:
> No output image created
> Warning - test failed!
> checking error on partial volume images:
> No output image created
> Warning - test failed!
> No output image created
> Warning - test failed!
> No output image created
> Warning - test failed!
> checking error on SIENAX volume outputs:
> % error = 42.5
> Warning - test failed!
> % error = 2.65
> Warning - test failed!
> % error = 53.06
> Warning - test failed!
> % error = 42.64
> Warning - test failed!
> % error = 95.71
> Warning - test failed!
>
> Starting BET2 at Do 5. Apr 14:02:42 CEST 2012
> checking error on T1 brain extraction:
> % error = 0.0
> checking error on skull and scalp surfaces:
> No output image created
> Warning - test failed!
> No output image created
> Warning - test failed!
> No output image created
> Warning - test failed!
>
> Starting FEAT at Do 5. Apr 14:13:52 CEST 2012
> checking error on filtered functional data:
> % error = 0.12
> checking error on raw Z stat images:
> % error = 0.31
> % error = 0.19
> % error = 0.26
> checking error on thresholded Z stat images:
> % error = 0.42
> % error = 0.35
> % error = 0.35
> checking error on registration images:
> % error = 0.0
> No output image created
> Warning - test failed!
> checking error on position of largest cluster of Talairached zfstat1:
> couldn't open "/home/christina/Desktop/feeds/results/fmri.feat/cluster_zfstat1_std.txt": no such file or directory
> while executing
> "open ${FEEDSDIR}/results/fmri.feat/cluster_zfstat1_std.txt r "
> invoked from within
> "if { $feeds(feat) } {
>
> puts "\nStarting FEAT at [ exec date ]"
>
> # fix FEAT setup file to use FEEDSDIR and FSLDIR
> fsl:exec "cp ${FEEDSDIR}/data/fmri.fe..."
> (file "./RUN" line 285)
> Command exited with non-zero status 1
> 1694.84user 19.56system 30:10.97elapsed 94%CPU (0avgtext+0avgdata 1587872maxresident)k
> 421184inputs+685184outputs (1082major+4143065minor)pagefaults 0swaps
>
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