That's nothing. Once someone wrote me because the tungsten atom of my
"Tungsten containing formate dehydrogenase" had dissapeared.
Lost in translation during some autoscripted conversion.
It was corrected soon enough.:)
Cheers,
Hans
Jan Dohnalek schreef:
> There have been other manipulations with user-input values. We could not
> input solvent content 83% for 3cg8 (the real value!!!) as "being out of
> the
> allowed range".
> The resulting value in the PDB is "NULL" not showing the actually
> interesting feature of the structure.
>
> I also noticed that the reported resolution values are nonsensically
> advertised with three decimal positions after the point which is not the
> way we would put it, is it?
>
> Either fight it or live with it ...
>
> Jan Dohnalek
>
>
>
>
> On Wed, Apr 25, 2012 at 12:23 AM, Phoebe Rice <[log in to unmask]> wrote:
>
>> I just noticed that the PDB has changed the stated resolution for one of
>> my old structures! It was refined against a very anisotropic data set
>> that
>> extended to 2.2 in the best direction only. When depositing I called
>> the
>> resolution 2.5 as a rough average of resolution in all 3 directions, but
>> now PDB is advertising it as 2.2, which is misleading.
>>
>> I'm afraid I may not have paid enough attention to the fine print on
>> this
>> issue - is the PDB now automatically advertising the "resolution" of a
>> structure as that of the outermost flyspeck used in refinement,
>> regardless
>> of more cautious assertions by the authors? If so, I object!
>>
>> =====================================
>> Phoebe A. Rice
>> Dept. of Biochemistry & Molecular Biology
>> The University of Chicago
>> phone 773 834 1723
>>
>> http://bmb.bsd.uchicago.edu/Faculty_and_Research/01_Faculty/01_Faculty_Alphabetically.php?faculty_id=123
>> http://www.rsc.org/shop/books/2008/9780854042722.asp
>>
>
>
>
> --
> Jan Dohnalek, Ph.D
> Institute of Macromolecular Chemistry
> Academy of Sciences of the Czech Republic
> Heyrovskeho nam. 2
> 16206 Praha 6
> Czech Republic
>
> Tel: +420 296 809 340
> Fax: +420 296 809 410
>
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