Dear All,
I am wondering if there is a way to do single-subject non-rigid image registration in SPM8: I would like to register a structural scan (such as MPRAGE or TSE) to an EPI scan, or register an EPI to the structural scan, get the parameters for this registration and apply them to a fMRI parameter map (to register the single-subject activation map to the structural scan)
What is the best way to do this in SPM8?
Until now I found the "High-Dimensional Warping" module and when I plug in the two scans (EPI and MPRAGE), I get a deformation field and Jacobian determinant image - but no registered image. Is there a second step where I have to apply these two results to one of the images? If so, how can I do that? I tried the "Deformations" module by using the y_* file and applying it to the structural scan. Same Result: The "registered" image is the same as the original image, i.e. no image deformation was performed.
I am running SPM8 on MATLAB 7.10 (R2010a) on a WinXP machine.
Thanks in advance and best regards,
Moritz
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