Hi Matthew,
thanks a lot - that was what I have been looking for.
I appreciate your response.
Cheers,
Andreas
Am 27.03.12 14:46 schrieb "Matthew Webster" unter
<[log in to unmask]>:
>Hello Andreas,
> The flirt call is in proc feat5:flirt in
>featlib.tcl:
>
> fsl:exec "${FSLDIR}/bin/flirt -ref $ref -in $in -out $out -omat
>${out}.mat -cost corratio -dof $dof -searchrx -$search $search -searchry
>-$search $search -searchrz -$search $search -interp $interp $init
>$in_weighting"
>
>a quick change of corratio to mutalinfo will change the cost function for
>all flirt calls - alternately you could put some logic in to use
>different cost-functions depending on the values of $ref and $out
>
>Many Regards
>
>Matthew
>
>> Good evening,
>>
>> can we tell Feat's Flirt registration of the EPI to highres to use
>> -searchcost mutualinfo instead of corratio? What would we need to edit?
>>I
>> could not pick it in feat.tcl
>> Cheers,
>> Andreas
>>
|