Not reliably or accurately I'm afraid.
We would recommend you use FreeSurfer to calculate cortical thickness.
All the best,
Mark
On 30 Jan 2012, at 16:38, Moran Artzi wrote:
> Dear Experts,
> Given GM mask (obtained using SIENX / other segmentation tool),
> is it possible to calculate cortical thickness map using one of FSL tools?
>
> Thanks
> Moran
>
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